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PODANS_1_16720 hypothetical protein [ Podospora anserina S mat+ ]

Gene ID: 6191750, updated on 17-May-2024

Summary

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Gene symbol
PODANS_1_16720
Gene description
hypothetical protein
Primary source
FungiDB:PODANS_1_16720
Locus tag
PODANS_1_16720
See related
VEuPathDB:PODANS_1_16720
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
PROVISIONAL
Organism
Podospora anserina S mat+ (strain: S mat+)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Lasiosphaeriaceae; Podospora
Old locus tag
PODANSg4151
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Genomic context

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See PODANS_1_16720 in Genome Data Viewer
Location:
chromosome: 1, map: unlocalized
Exon count:
3

NW_001914853.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001914853.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of the model ascomycete fungus Podospora anserina. Espagne E, et al. Genome Biol, 2008. PMID 18460219, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of nuclear-transcribed mRNA poly(A) tail shortening IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of RNA polymerase II, core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001914853.1 Reference assembly

    Range
    829784..830686 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001907083.1 → XP_001907118.1  uncharacterized protein PODANS_1_16720 [Podospora anserina S mat+]

    See identical proteins and their annotated locations for XP_001907118.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B2ATR6
    Conserved Domains (3) summary
    cd04329
    Location:2 → 80
    RNAP_II_Rpb7_N; RNAP_II_Rpb7_N: Rpb7, N-terminal ribonucleoprotein (RNP) domain. Rpb7 is a subunit of eukaryotic RNA polymerase (RNAP) II that is homologous to Rpc25 of RNAP III, RpoE of archaeal RNAP, and Rpa43 of eukaryotic RNAP I. Rpb7 heterodimerizes with Rpb4 and ...
    cd04462
    Location:80 → 167
    S1_RNAPII_Rpb7; S1_RNAPII_Rpb7: Eukaryotic RNA polymerase II (RNAPII) Rpb7 subunit C-terminal S1 domain. RNAPII is composed of 12 subunits (Rpb1-12). Rpb4 and Rpb7 form a heterodimer that associate with the RNAPII core. Rpb7 is a homolog of the Rpc25 of RNA polymerase ...
    PTZ00162
    Location:1 → 167
    PTZ00162; DNA-directed RNA polymerase II subunit 7; Provisional
Nucleotide Protein
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