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ZBED3 zinc finger BED-type containing 3 [ Bos taurus (domestic cattle) ]

Gene ID: 615651, updated on 17-Aug-2024

Summary

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Official Symbol
ZBED3provided by VGNC
Official Full Name
zinc finger BED-type containing 3provided by VGNC
Primary source
VGNC:VGNC:107034
See related
Ensembl:ENSBTAG00000065804
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (8230681..8253322, complement)

Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene corticotropin releasing hormone binding protein Neighboring gene angiogenic factor with G-patch and FHA domains 1 Neighboring gene uncharacterized LOC107132813 Neighboring gene small nucleolar RNA SNORA47 Neighboring gene phosphodiesterase 8B Neighboring gene small nucleolar RNA SNORA41 Neighboring gene WD repeat domain 41

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger BED domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    8230681..8253322 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024997895.2 → XP_024853663.1  zinc finger BED domain-containing protein 3

    UniProtKB/TrEMBL
    A0AAA9S7L4
    Related
    ENSBTAP00000077049.1, ENSBTAT00000107467.1
    Conserved Domains (1) summary
    smart00614
    Location:29 → 82
    ZnF_BED; BED zinc finger

  2. XM_002690439.6 → XP_002690485.1  zinc finger BED domain-containing protein 3

    See identical proteins and their annotated locations for XP_002690485.1

    UniProtKB/TrEMBL
    A0AAA9S7L4
    Conserved Domains (1) summary
    smart00614
    Location:29 → 82
    ZnF_BED; BED zinc finger

  3. XM_005211239.5 → XP_005211296.1  zinc finger BED domain-containing protein 3

    See identical proteins and their annotated locations for XP_005211296.1

    UniProtKB/TrEMBL
    A0AAA9S7L4
    Related
    ENSBTAP00000082005.1, ENSBTAT00000096960.1
    Conserved Domains (1) summary
    smart00614
    Location:29 → 82
    ZnF_BED; BED zinc finger
Nucleotide Protein Strain
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