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LOC612694 protein LEG1 homolog [ Canis lupus familiaris (dog) ]

Gene ID: 612694, updated on 22-Jan-2024

Summary

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Gene symbol
LOC612694
Gene description
protein LEG1 homolog
See related
Ensembl:ENSCAFG00845000630
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
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Genomic context

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See LOC612694 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (66515207..66540528, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (67117018..67131084, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (66870788..66890466, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (66437761..66462931, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (66225004..66250272, complement)

Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111096260 Neighboring gene chromosome 1 C6orf58 homolog Neighboring gene U6 spliceosomal RNA Neighboring gene thymocyte selection associated Neighboring gene uncharacterized LOC111096271 Neighboring gene protein tyrosine phosphatase receptor type K

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: protein LEG1 homolog; protein LEG1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051805.1 Reference ROS_Cfam_1.0

    Range
    66515207..66540528 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038653739.1 → XP_038509667.1  protein LEG1 homolog isoform X3

    UniProtKB/TrEMBL
    A0A8C0L775
    Conserved Domains (1) summary
    pfam05612
    Location:30 → 273
    Leg1

  2. XM_038653737.1 → XP_038509665.1  protein LEG1 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C0MNZ9, A0A8C0Q3D0
    Conserved Domains (1) summary
    pfam05612
    Location:30 → 302
    Leg1

  3. XM_038653738.1 → XP_038509666.1  protein LEG1 homolog isoform X2

    UniProtKB/TrEMBL
    A0A8C0L775, A0A8C0Q765, A0A8I3MWH2
    Related
    ENSCAFP00845000778.1, ENSCAFT00845001027.1
    Conserved Domains (1) summary
    pfam05612
    Location:30 → 333
    Leg1

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049261.1 Alternate UMICH_Zoey_3.1

    Range
    66437761..66462931 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038465022.1 → XP_038320950.1  protein LEG1 homolog isoform X3

    Conserved Domains (1) summary
    pfam05612
    Location:30 → 273
    Leg1

  2. XM_038465020.1 → XP_038320948.1  protein LEG1 homolog isoform X1

    Conserved Domains (1) summary
    pfam05612
    Location:30 → 302
    Leg1

  3. XM_038465021.1 → XP_038320949.1  protein LEG1 homolog isoform X2

    Conserved Domains (1) summary
    pfam05612
    Location:30 → 333
    Leg1

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

    Range
    66225004..66250272 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038589808.1 → XP_038445736.1  protein LEG1 homolog isoform X3

    Conserved Domains (1) summary
    pfam05612
    Location:30 → 273
    Leg1

  2. XM_038589806.1 → XP_038445734.1  protein LEG1 homolog isoform X1

    Conserved Domains (1) summary
    pfam05612
    Location:30 → 302
    Leg1

  3. XM_038589807.1 → XP_038445735.1  protein LEG1 homolog isoform X2

    Conserved Domains (1) summary
    pfam05612
    Location:30 → 333
    Leg1

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

    Range
    66870788..66890466 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038525610.1 → XP_038381538.1  LOW QUALITY PROTEIN: protein LEG1 homolog isoform X2

    UniProtKB/TrEMBL
    A0A8C0L775, A0A8C0Q765, A0A8I3MWH2
    Conserved Domains (1) summary
    pfam05612
    Location:30 → 333
    Leg1

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    67117018..67131084 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038426398.1 → XP_038282326.1  protein LEG1 homolog isoform X4

    UniProtKB/TrEMBL
    A0A8C0LBM7
    Conserved Domains (1) summary
    pfam05612
    Location:13 → 185
    Leg1
Nucleotide Protein
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