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PDGFRL platelet derived growth factor receptor like [ Canis lupus familiaris (dog) ]

Gene ID: 607033, updated on 17-Aug-2024

Summary

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Official Symbol
PDGFRLprovided by VGNC
Official Full Name
platelet derived growth factor receptor likeprovided by VGNC
Primary source
VGNC:VGNC:44374
See related
Ensembl:ENSCAFG00845014856
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
6
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 16 NC_051820.1 (42945216..43010559)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 16 NC_006598.4 (41396499..41461833)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 16 NC_049237.1 (41776857..41842200)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 16 NC_049276.1 (41038523..41103835)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 16 NC_049757.1 (41582239..41647536)

Chromosome 16 - NC_051820.1Genomic Context describing neighboring genes Neighboring gene myotubularin related protein 7 Neighboring gene uncharacterized LOC111090330 Neighboring gene solute carrier family 7 member 2 Neighboring gene uncharacterized LOC111090331 Neighboring gene cell division control protein 42 homolog Neighboring gene microtubule associated scaffold protein 1 Neighboring gene G patch domain-containing protein 11-like Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
platelet-derived growth factor receptor-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051820.1 Reference ROS_Cfam_1.0

    Range
    42945216..43010559
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038690075.1 → XP_038546003.1  platelet-derived growth factor receptor-like protein

    UniProtKB/TrEMBL
    A0A8C0QHQ6, A0A8C0QSS3, A0A8I3NZC5, A0A8P0T698
    Related
    ENSCAFP00845020952.1, ENSCAFT00845026582.1
    Conserved Domains (3) summary
    smart00410
    Location:83 → 143
    IG_like; Immunoglobulin like
    cd00096
    Location:281 → 285
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:278 → 372
    Ig; Immunoglobulin domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049276.1 Alternate UMICH_Zoey_3.1

    Range
    41038523..41103835
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038497795.1 → XP_038353723.1  platelet-derived growth factor receptor-like protein

    Conserved Domains (3) summary
    smart00410
    Location:83 → 143
    IG_like; Immunoglobulin like
    cd00096
    Location:281 → 285
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:278 → 372
    Ig; Immunoglobulin domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049757.1 Alternate UNSW_CanFamBas_1.0

    Range
    41582239..41647536
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038624322.1 → XP_038480250.1  platelet-derived growth factor receptor-like protein

    Conserved Domains (3) summary
    smart00410
    Location:83 → 143
    IG_like; Immunoglobulin like
    cd00096
    Location:281 → 285
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:278 → 372
    Ig; Immunoglobulin domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049237.1 Alternate UU_Cfam_GSD_1.0

    Range
    41776857..41842200
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038560273.1 → XP_038416201.1  platelet-derived growth factor receptor-like protein

    UniProtKB/TrEMBL
    A0A8C0QHQ6, A0A8C0QSS3, A0A8I3NZC5, A0A8P0T698
    Conserved Domains (3) summary
    smart00410
    Location:83 → 143
    IG_like; Immunoglobulin like
    cd00096
    Location:281 → 285
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:278 → 372
    Ig; Immunoglobulin domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006598.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    41396499..41461833
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005629942.4 → XP_005629999.1  platelet-derived growth factor receptor-like protein

    See identical proteins and their annotated locations for XP_005629999.1

    UniProtKB/TrEMBL
    A0A8C0QHQ6, A0A8C0QSS3, A0A8I3NZC5, A0A8P0T698
    Conserved Domains (3) summary
    smart00410
    Location:83 → 143
    IG_like; Immunoglobulin like
    cd00096
    Location:281 → 285
    Ig; Ig strand A' [structural motif]
    cl11960
    Location:278 → 372
    Ig; Immunoglobulin domain
Nucleotide Protein
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