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LOC6047330 chitooligosaccharidolytic beta-N-acetylglucosaminidase [ Culex quinquefasciatus (southern house mosquito) ]

Gene ID: 6047330, updated on 26-Mar-2024

Summary

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Gene symbol
LOC6047330
Gene description
chitooligosaccharidolytic beta-N-acetylglucosaminidase
See related
VectorBase:CQUJHB002513; EnsemblRapid:LOC6047330
Gene type
protein coding
RefSeq status
MODEL
Organism
Culex quinquefasciatus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Culicini; Culex; Culex
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Genomic context

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Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
100 current VPISU_Cqui_1.0_pri_paternal (GCF_015732765.1) 3 NC_051863.1 (127039364..127045167)

Chromosome 3 - NC_051863.1Genomic Context describing neighboring genes Neighboring gene retinaldehyde-binding protein 1 Neighboring gene uncharacterized LOC119769631 Neighboring gene general transcription factor IIE subunit 2 Neighboring gene chitooligosaccharidolytic beta-N-acetylglucosaminidase Neighboring gene transmembrane protein 50A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051863.1 Chromosome 3 Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-N-acetylhexosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ganglioside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosaminoglycan metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitooligosaccharidolytic beta-N-acetylglucosaminidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Culex quinquefasciatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

Genomic

  1. NC_051863.1 Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

    Range
    127039364..127045167
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038263269.1 → XP_038119197.1  chitooligosaccharidolytic beta-N-acetylglucosaminidase

    UniProtKB/TrEMBL
    B0X434
    Related
    XP_038119197.1, XM_038263269.1
    Conserved Domains (2) summary
    cd06562
    Location:217 → 584
    GH20_HexA_HexB-like; Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the ...
    cl03741
    Location:74 → 193
    Glyco_hydro_20b; Glycosyl hydrolase family 20, domain 2

  2. XM_038263270.1 → XP_038119198.1  chitooligosaccharidolytic beta-N-acetylglucosaminidase

    UniProtKB/TrEMBL
    B0X434
    Related
    XP_038119198.1, XM_038263270.1
    Conserved Domains (2) summary
    cd06562
    Location:217 → 584
    GH20_HexA_HexB-like; Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the ...
    cl03741
    Location:74 → 193
    Glyco_hydro_20b; Glycosyl hydrolase family 20, domain 2
Nucleotide Protein Strain
Heading Accession and Version

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