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LOC6046271 inactive rhomboid protein 1 [ Culex quinquefasciatus (southern house mosquito) ]

Gene ID: 6046271, updated on 26-Mar-2024

Summary

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Gene symbol
LOC6046271
Gene description
inactive rhomboid protein 1
See related
VectorBase:CQUJHB008176; EnsemblRapid:LOC6046271
Gene type
protein coding
RefSeq status
MODEL
Organism
Culex quinquefasciatus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Culicini; Culex; Culex
Also known as
rhomboid
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Genomic context

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See LOC6046271 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
100 current VPISU_Cqui_1.0_pri_paternal (GCF_015732765.1) 3 NC_051863.1 (49887995..49913643)

Chromosome 3 - NC_051863.1Genomic Context describing neighboring genes Neighboring gene astacin Neighboring gene zinc metalloproteinase nas-14 Neighboring gene uncharacterized LOC6046275 Neighboring gene proteasome activator complex subunit 4B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051863.1 Chromosome 3 Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of epidermal growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inactive rhomboid protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Culex quinquefasciatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

Genomic

  1. NC_051863.1 Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

    Range
    49887995..49913643
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038263208.1 → XP_038119136.1  inactive rhomboid protein 1 isoform X1

    Related
    XP_038119136.1, XM_038263208.1
    Conserved Domains (2) summary
    pfam05109
    Location:234 → 550
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam01694
    Location:1181 → 1319
    Rhomboid; Rhomboid family

  2. XM_038263209.1 → XP_038119137.1  inactive rhomboid protein 1 isoform X2

    UniProtKB/TrEMBL
    B0X1H9
    Related
    XP_038119137.1, XM_038263209.1
    Conserved Domains (2) summary
    pfam05109
    Location:232 → 548
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam01694
    Location:1179 → 1317
    Rhomboid; Rhomboid family
Nucleotide Protein Strain
Heading Accession and Version

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