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Lrrk Leucine-rich repeat kinase [ Culex quinquefasciatus (southern house mosquito) ]

Gene ID: 6045236, updated on 23-May-2024

Summary

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Gene symbol
Lrrk
Gene description
Leucine-rich repeat kinase
See related
VectorBase:CQUJHB002334; EnsemblRapid:LOC6045236
Gene type
protein coding
RefSeq status
MODEL
Organism
Culex quinquefasciatus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Culicini; Culex; Culex
Orthologs
fruit fly all
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Genomic context

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See Lrrk in Genome Data Viewer
Location:
chromosome: 1
Exon count:
14
Annotation release Status Assembly Chr Location
100 current VPISU_Cqui_1.0_pri_paternal (GCF_015732765.1) 1 NC_051861.1 (103797689..103859175)

Chromosome 1 - NC_051861.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6049292 Neighboring gene cilia- and flagella-associated protein 299-like Neighboring gene phenoloxidase-activating factor 2 Neighboring gene mitochondrial import inner membrane translocase subunit TIM44 Neighboring gene uncharacterized LOC119765300 Neighboring gene 26S proteasome non-ATPase regulatory subunit 10 Neighboring gene DNA damage-regulated autophagy modulator protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051861.1 Chromosome 1 Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat serine/threonine-protein kinase 1
Names
V-1 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Culex quinquefasciatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

Genomic

  1. NC_051861.1 Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

    Range
    103797689..103859175
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038248890.1 → XP_038104818.1  leucine-rich repeat serine/threonine-protein kinase 1 isoform X2

    UniProtKB/TrEMBL
    B0WZ06
    Related
    XP_038104818.1, XM_038248890.1
    Conserved Domains (8) summary
    PRK15370
    Location:594 → 726
    PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
    COG4886
    Location:590 → 866
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:595 → 617
    LRR_RI; leucine-rich repeat [structural motif]
    sd00045
    Location:47 → 78
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:191 → 276
    Ank_2; Ankyrin repeats (3 copies)
    pfam16095
    Location:1303 → 1461
    COR; C-terminal of Roc, COR, domain
    cl21453
    Location:1877 → 2171
    PKc_like; Protein Kinases, catalytic domain
    cl38936
    Location:1078 → 1284
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  2. XM_038248891.1 → XP_038104819.1  leucine-rich repeat serine/threonine-protein kinase 1 isoform X3

    UniProtKB/TrEMBL
    B0WZ06
    Related
    XP_038104819.1, XM_038248891.1
    Conserved Domains (8) summary
    PRK15370
    Location:586 → 718
    PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
    COG4886
    Location:582 → 858
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:587 → 609
    LRR_RI; leucine-rich repeat [structural motif]
    sd00045
    Location:47 → 78
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:191 → 276
    Ank_2; Ankyrin repeats (3 copies)
    pfam16095
    Location:1295 → 1453
    COR; C-terminal of Roc, COR, domain
    cl21453
    Location:1869 → 2163
    PKc_like; Protein Kinases, catalytic domain
    cl38936
    Location:1070 → 1276
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  3. XM_038248888.1 → XP_038104816.1  leucine-rich repeat serine/threonine-protein kinase 1 isoform X1

    UniProtKB/TrEMBL
    B0WZ06
    Related
    XP_038104816.1, XM_038248888.1
    Conserved Domains (9) summary
    PRK15370
    Location:600 → 732
    PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
    COG0666
    Location:119 → 367
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    COG4886
    Location:596 → 872
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:601 → 623
    LRR_RI; leucine-rich repeat [structural motif]
    sd00045
    Location:53 → 84
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:197 → 282
    Ank_2; Ankyrin repeats (3 copies)
    pfam16095
    Location:1309 → 1467
    COR; C-terminal of Roc, COR, domain
    cl21453
    Location:1883 → 2177
    PKc_like; Protein Kinases, catalytic domain
    cl38936
    Location:1084 → 1290
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  4. XM_038248892.1 → XP_038104820.1  leucine-rich repeat serine/threonine-protein kinase 1 isoform X4

    UniProtKB/TrEMBL
    B0WZ06
    Related
    XP_038104820.1, XM_038248892.1
    Conserved Domains (9) summary
    PRK15370
    Location:489 → 621
    PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
    COG0666
    Location:14 → 232
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    COG4886
    Location:485 → 761
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:490 → 512
    LRR_RI; leucine-rich repeat [structural motif]
    sd00045
    Location:83 → 114
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:86 → 171
    Ank_2; Ankyrin repeats (3 copies)
    pfam16095
    Location:1198 → 1356
    COR; C-terminal of Roc, COR, domain
    cl21453
    Location:1772 → 2066
    PKc_like; Protein Kinases, catalytic domain
    cl38936
    Location:973 → 1179
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  5. XM_038248893.1 → XP_038104821.1  leucine-rich repeat serine/threonine-protein kinase 1 isoform X5

    UniProtKB/TrEMBL
    B0WZ06
    Related
    XP_038104821.1, XM_038248893.1
    Conserved Domains (9) summary
    PRK15370
    Location:481 → 613
    PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
    COG0666
    Location:14 → 224
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    COG4886
    Location:477 → 753
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:482 → 504
    LRR_RI; leucine-rich repeat [structural motif]
    sd00045
    Location:83 → 114
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:86 → 171
    Ank_2; Ankyrin repeats (3 copies)
    pfam16095
    Location:1190 → 1348
    COR; C-terminal of Roc, COR, domain
    cl21453
    Location:1764 → 2058
    PKc_like; Protein Kinases, catalytic domain
    cl38936
    Location:965 → 1171
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein Strain
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