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Rab3-GEF Rab3 GDP-GTP exchange factor [ Culex quinquefasciatus (southern house mosquito) ]

Gene ID: 6042687, updated on 23-May-2024

Summary

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Gene symbol
Rab3-GEF
Gene description
Rab3 GDP-GTP exchange factor
See related
VectorBase:CQUJHB004337; EnsemblRapid:LOC6042687
Gene type
protein coding
RefSeq status
MODEL
Organism
Culex quinquefasciatus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Culicini; Culex; Culex
Orthologs
fruit fly all
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Genomic context

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See Rab3-GEF in Genome Data Viewer
Location:
chromosome: 1
Exon count:
20
Annotation release Status Assembly Chr Location
100 current VPISU_Cqui_1.0_pri_paternal (GCF_015732765.1) 1 NC_051861.1 (101792253..101844284)

Chromosome 1 - NC_051861.1Genomic Context describing neighboring genes Neighboring gene poly(ADP-ribose) glycohydrolase Neighboring gene T-complex protein 11-like protein 1 Neighboring gene uncharacterized LOC119765305 Neighboring gene nose resistant to fluoxetine protein 6 Neighboring gene probable cytochrome P450 9f2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051861.1 Chromosome 1 Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of Rab protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
MAP kinase-activating death domain protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Culex quinquefasciatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

Genomic

  1. NC_051861.1 Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

    Range
    101792253..101844284
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038255549.1 → XP_038111477.1  MAP kinase-activating death domain protein isoform X1

    UniProtKB/TrEMBL
    B0WST9
    Related
    XP_038111477.1, XM_038255549.1
    Conserved Domains (6) summary
    smart00801
    Location:609 → 672
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00799
    Location:251 → 477
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    PHA03378
    Location:1920 → 2028
    PHA03378; EBNA-3B; Provisional
    PRK09510
    Location:996 → 1042
    tolA; cell envelope integrity inner membrane protein TolA; Provisional
    PRK11448
    Location:947 → 1042
    hsdR; type I restriction enzyme EcoKI subunit R; Provisional
    pfam03456
    Location:63 → 128
    uDENN; uDENN domain

  2. XM_038255709.1 → XP_038111637.1  MAP kinase-activating death domain protein isoform X4

    UniProtKB/TrEMBL
    B0WST9
    Related
    XP_038111637.1, XM_038255709.1
    Conserved Domains (4) summary
    smart00801
    Location:609 → 672
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00799
    Location:251 → 477
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    PHA03378
    Location:1896 → 2004
    PHA03378; EBNA-3B; Provisional
    pfam03456
    Location:63 → 128
    uDENN; uDENN domain

  3. XM_038255756.1 → XP_038111684.1  MAP kinase-activating death domain protein isoform X5

    UniProtKB/TrEMBL
    B0WST9
    Related
    XP_038111684.1, XM_038255756.1
    Conserved Domains (4) summary
    smart00801
    Location:609 → 672
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00799
    Location:251 → 477
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    PHA03378
    Location:1893 → 2001
    PHA03378; EBNA-3B; Provisional
    pfam03456
    Location:63 → 128
    uDENN; uDENN domain

  4. XM_038255655.1 → XP_038111583.1  MAP kinase-activating death domain protein isoform X3

    UniProtKB/TrEMBL
    B0WST9
    Related
    XP_038111583.1, XM_038255655.1
    Conserved Domains (6) summary
    smart00801
    Location:598 → 661
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00799
    Location:251 → 477
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    PHA03378
    Location:1909 → 2017
    PHA03378; EBNA-3B; Provisional
    PRK09510
    Location:985 → 1031
    tolA; cell envelope integrity inner membrane protein TolA; Provisional
    PRK11448
    Location:936 → 1031
    hsdR; type I restriction enzyme EcoKI subunit R; Provisional
    pfam03456
    Location:63 → 128
    uDENN; uDENN domain

  5. XM_038255599.1 → XP_038111527.1  MAP kinase-activating death domain protein isoform X2

    UniProtKB/TrEMBL
    B0WST9
    Related
    XP_038111527.1, XM_038255599.1
    Conserved Domains (6) summary
    smart00801
    Location:606 → 669
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00799
    Location:248 → 474
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    PHA03378
    Location:1917 → 2025
    PHA03378; EBNA-3B; Provisional
    PRK09510
    Location:993 → 1039
    tolA; cell envelope integrity inner membrane protein TolA; Provisional
    PRK11448
    Location:944 → 1039
    hsdR; type I restriction enzyme EcoKI subunit R; Provisional
    pfam03456
    Location:63 → 128
    uDENN; uDENN domain

  6. XM_038255818.1 → XP_038111746.1  MAP kinase-activating death domain protein isoform X6

    UniProtKB/TrEMBL
    B0WST9
    Related
    XP_038111746.1, XM_038255818.1
    Conserved Domains (6) summary
    smart00801
    Location:606 → 669
    dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
    smart00799
    Location:248 → 474
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    PHA03378
    Location:1914 → 2022
    PHA03378; EBNA-3B; Provisional
    PRK09510
    Location:993 → 1039
    tolA; cell envelope integrity inner membrane protein TolA; Provisional
    PRK11448
    Location:944 → 1039
    hsdR; type I restriction enzyme EcoKI subunit R; Provisional
    pfam03456
    Location:63 → 128
    uDENN; uDENN domain
Nucleotide Protein Strain
Heading Accession and Version

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