U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC6042017 cytoplasmic polyadenylation element-binding protein 2 [ Culex quinquefasciatus (southern house mosquito) ]

Gene ID: 6042017, updated on 10-May-2024

Summary

Go to the top of the page Help
Gene symbol
LOC6042017
Gene description
cytoplasmic polyadenylation element-binding protein 2
See related
VectorBase:CQUJHB013314; EnsemblRapid:LOC6042017
Gene type
protein coding
RefSeq status
MODEL
Organism
Culex quinquefasciatus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Culicini; Culex; Culex
Orthologs
fruit fly all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC6042017 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
100 current VPISU_Cqui_1.0_pri_paternal (GCF_015732765.1) 1 NC_051861.1 (28221894..28827872, complement)

Chromosome 1 - NC_051861.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119767087 Neighboring gene uncharacterized LOC119767088 Neighboring gene uncharacterized LOC119767092 Neighboring gene integrator complex subunit 13 asun Neighboring gene uncharacterized LOC6041819 Neighboring gene uncharacterized LOC6040706 Neighboring gene integrator complex subunit 12

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_051861.1 Chromosome 1 Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA 3'-UTR binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA regulatory element binding translation repressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation factor activity, RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of cytoplasmic translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of messenger ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cytoplasmic polyadenylation element-binding protein 2
Names
cytoplasmic polyadenylation element binding protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Culex quinquefasciatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

Genomic

  1. NC_051861.1 Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

    Range
    28221894..28827872 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038254618.1 → XP_038110546.1  cytoplasmic polyadenylation element-binding protein 2 isoform X1

    Related
    XP_038110546.1, XM_038254618.1
    Conserved Domains (3) summary
    pfam16366
    Location:790 → 851
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
    cd12724
    Location:607 → 698
    RRM1_CPEB2_like; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:715 → 795
    RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens

  2. XM_038254624.1 → XP_038110552.1  cytoplasmic polyadenylation element-binding protein 2 isoform X2

    Related
    XP_038110552.1, XM_038254624.1
    Conserved Domains (3) summary
    pfam16366
    Location:779 → 840
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
    cd12724
    Location:596 → 687
    RRM1_CPEB2_like; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:704 → 784
    RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens

  3. XM_038254613.1 → XP_038110541.1  cytoplasmic polyadenylation element-binding protein 2 isoform X1

    Related
    XP_038110541.1, XM_038254613.1
    Conserved Domains (3) summary
    pfam16366
    Location:790 → 851
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
    cd12724
    Location:607 → 698
    RRM1_CPEB2_like; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:715 → 795
    RRM2_CPEB2_like; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials