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CC1G_01317 hypothetical protein [ Coprinopsis cinerea okayama7#130 ]

Gene ID: 6013961, updated on 17-May-2024

Summary

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Gene symbol
CC1G_01317
Gene description
hypothetical protein
Primary source
FungiDB:CC1G_01317
Locus tag
CC1G_01317
See related
VEuPathDB:CC1G_01317
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Coprinopsis cinerea okayama7#130 (strain: okayama7#130)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Psathyrellaceae; Coprinopsis
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Genomic context

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See CC1G_01317 in Genome Data Viewer
Location:
chromosome: 5, map: unlocalized
Exon count:
13

NW_003307540.1Genomic Context describing neighboring genes Neighboring gene endochitinase Neighboring gene aminopeptidase Neighboring gene hypothetical protein Neighboring gene mis5 protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003307540.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus). Stajich JE, et al. Proc Natl Acad Sci U S A, 2010 Jun 29. PMID 20547848, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in phosphatidylinositol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PAS complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in fungal-type vacuole membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003307540.1 Reference assembly

    Range
    2142984..2146724
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001837353.2 → XP_001837405.2  hypothetical protein CC1G_01317 [Coprinopsis cinerea okayama7#130]

    See identical proteins and their annotated locations for XP_001837405.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A8NYE1
    Conserved Domains (3) summary
    pfam11916
    Location:674 → 849
    Vac14_Fig4_bd; Vacuolar protein 14 C-terminal Fig4p binding
    pfam12755
    Location:60 → 156
    Vac14_Fab1_bd; Vacuolar 14 Fab1-binding region
    sd00044
    Location:45 → 71
    HEAT; HEAT repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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