U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CC1G_12572 fatty acid hydroxylase [ Coprinopsis cinerea okayama7#130 ]

Gene ID: 6012934, updated on 17-May-2024

Summary

Go to the top of the page Help
Gene symbol
CC1G_12572
Gene description
fatty acid hydroxylase
Primary source
FungiDB:CC1G_12572
Locus tag
CC1G_12572
See related
VEuPathDB:CC1G_12572
Gene type
protein coding
RNA name
fatty acid hydroxylase
RefSeq status
PROVISIONAL
Organism
Coprinopsis cinerea okayama7#130 (strain: okayama7#130)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Psathyrellaceae; Coprinopsis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CC1G_12572 in Genome Data Viewer
Location:
chromosome: 4, map: unlocalized
Exon count:
5

NW_003307541.1Genomic Context describing neighboring genes Neighboring gene KapM protein Neighboring gene Poly(A)+ RNA export protein Neighboring gene high nitrogen upregulated cytochrome P450 monooxygenase 2 Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_003307541.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus). Stajich JE, et al. Proc Natl Acad Sci U S A, 2010 Jun 29. PMID 20547848, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Names
fatty acid hydroxylase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003307541.1 Reference assembly

    Range
    2242228..2243568 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001836339.2 → XP_001836391.2  fatty acid hydroxylase [Coprinopsis cinerea okayama7#130]

    See identical proteins and their annotated locations for XP_001836391.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A8NU72
    Conserved Domains (2) summary
    COG3000
    Location:79 → 333
    ERG3; Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily [Lipid transport and metabolism]
    pfam04116
    Location:182 → 312
    FA_hydroxylase; Fatty acid hydroxylase superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials