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CC1G_04984 atypical/RIO/RIO1 protein kinase [ Coprinopsis cinerea okayama7#130 ]

Gene ID: 6012531, updated on 17-May-2024

Summary

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Gene symbol
CC1G_04984
Gene description
atypical/RIO/RIO1 protein kinase
Primary source
FungiDB:CC1G_04984
Locus tag
CC1G_04984
Gene type
protein coding
RNA name
atypical/RIO/RIO1 protein kinase
RefSeq status
PROVISIONAL
Organism
Coprinopsis cinerea okayama7#130 (strain: okayama7#130)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Psathyrellaceae; Coprinopsis
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Genomic context

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See CC1G_04984 in Genome Data Viewer
Location:
chromosome: 8, map: unlocalized
Exon count:
4

NW_003307537.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003307537.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus). Stajich JE, et al. Proc Natl Acad Sci U S A, 2010 Jun 29. PMID 20547848, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of preribosome, small subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
atypical/RIO/RIO1 protein kinase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003307537.1 Reference assembly

    Range
    1743509..1745434 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001835939.2 → XP_001835991.2  atypical/RIO/RIO1 protein kinase [Coprinopsis cinerea okayama7#130]

    See identical proteins and their annotated locations for XP_001835991.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A8NSE1
    Conserved Domains (2) summary
    COG1718
    Location:185 → 430
    RIO1; Serine/threonine-protein kinase RIO1 [Signal transduction mechanisms]
    cd05147
    Location:217 → 405
    RIO1_euk; Catalytic domain of the atypical protein serine kinase, Eukaryotic RIO1 kinase
Nucleotide Protein
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