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CC1G_09808 ribose-5-phosphate isomerase [ Coprinopsis cinerea okayama7#130 ]

Gene ID: 6011400, updated on 17-May-2024

Summary

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Gene symbol
CC1G_09808
Gene description
ribose-5-phosphate isomerase
Primary source
FungiDB:CC1G_09808
Locus tag
CC1G_09808
See related
VEuPathDB:CC1G_09808
Gene type
protein coding
RNA name
ribose-5-phosphate isomerase
RefSeq status
PROVISIONAL
Organism
Coprinopsis cinerea okayama7#130 (strain: okayama7#130)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Psathyrellaceae; Coprinopsis
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Genomic context

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See CC1G_09808 in Genome Data Viewer
Location:
chromosome: 12, map: unlocalized
Exon count:
6

NW_003307533.1Genomic Context describing neighboring genes Neighboring gene mitochondrial chaperone BCS1 Neighboring gene hypothetical protein Neighboring gene arom polypeptide Neighboring gene other/AgaK1 protein kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003307533.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus). Stajich JE, et al. Proc Natl Acad Sci U S A, 2010 Jun 29. PMID 20547848, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ribose-5-phosphate isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-ribose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt, non-oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
ribose-5-phosphate isomerase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003307533.1 Reference assembly

    Range
    820338..821517
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001834829.1 → XP_001834881.1  ribose-5-phosphate isomerase [Coprinopsis cinerea okayama7#130]

    See identical proteins and their annotated locations for XP_001834881.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A8NMB3
    Conserved Domains (1) summary
    cd01398
    Location:51 → 272
    RPI_A; RPI_A: Ribose 5-phosphate isomerase type A (RPI_A) subfamily; RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate, the first step of the non-oxidative branch of the pentose phosphate pathway. This reaction leads to the ...
Nucleotide Protein
Heading Accession and Version

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Research Materials