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CC1G_05818 WD repeat-containing protein 46 [ Coprinopsis cinerea okayama7#130 ]

Gene ID: 6011198, updated on 17-May-2024

Summary

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Gene symbol
CC1G_05818
Gene description
WD repeat-containing protein 46
Primary source
FungiDB:CC1G_05818
Locus tag
CC1G_05818
See related
VEuPathDB:CC1G_05818
Gene type
protein coding
RNA name
WD repeat-containing protein 46
RefSeq status
PROVISIONAL
Organism
Coprinopsis cinerea okayama7#130 (strain: okayama7#130)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Psathyrellaceae; Coprinopsis
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Genomic context

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See CC1G_05818 in Genome Data Viewer
Location:
chromosome: 12, map: unlocalized
Exon count:
8

NW_003307533.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene salicylate 1-monooxygenase Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003307533.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus). Stajich JE, et al. Proc Natl Acad Sci U S A, 2010 Jun 29. PMID 20547848, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
WD repeat-containing protein 46

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003307533.1 Reference assembly

    Range
    256243..258808
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001834629.1 → XP_001834681.1  WD repeat-containing protein 46 [Coprinopsis cinerea okayama7#130]

    See identical proteins and their annotated locations for XP_001834681.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A8NLG6
    Conserved Domains (3) summary
    COG2319
    Location:151 → 467
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:205 → 280
    7WD40; WD40 repeat [structural motif]
    pfam08149
    Location:441 → 519
    BING4CT; BING4CT (NUC141) domain
Nucleotide Protein
Heading Accession and Version

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