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CC1G_11825 oligoribonuclease [ Coprinopsis cinerea okayama7#130 ]

Gene ID: 6006661, updated on 17-May-2024

Summary

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Gene symbol
CC1G_11825
Gene description
oligoribonuclease
Primary source
FungiDB:CC1G_11825
Locus tag
CC1G_11825
See related
VEuPathDB:CC1G_11825
Gene type
protein coding
RNA name
oligoribonuclease
RefSeq status
PROVISIONAL
Organism
Coprinopsis cinerea okayama7#130 (strain: okayama7#130)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Psathyrellaceae; Coprinopsis
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Genomic context

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See CC1G_11825 in Genome Data Viewer
Location:
chromosome: 3, map: unlocalized
Exon count:
8

NW_003307542.1Genomic Context describing neighboring genes Neighboring gene carbamoyl-phosphate synthase subunit arginine-specific large Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene tyrosinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003307542.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus). Stajich JE, et al. Proc Natl Acad Sci U S A, 2010 Jun 29. PMID 20547848, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5'-RNA exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
oligoribonuclease

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003307542.1 Reference assembly

    Range
    1408280..1409317 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001830170.1 → XP_001830222.1  oligoribonuclease [Coprinopsis cinerea okayama7#130]

    See identical proteins and their annotated locations for XP_001830222.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A8N5S7
    Conserved Domains (2) summary
    cd06135
    Location:15 → 204
    Orn; DEDDh 3'-5' exonuclease domain of oligoribonuclease and similar proteins
    COG0847
    Location:1 → 188
    DnaQ; DNA polymerase III, epsilon subunit or related 3'-5' exonuclease [Replication, recombination and repair]
Nucleotide Protein
Heading Accession and Version

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