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CC1G_03774 ROK1 [ Coprinopsis cinerea okayama7#130 ]

Gene ID: 6005406, updated on 17-May-2024

Summary

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Gene symbol
CC1G_03774
Gene description
ROK1
Primary source
FungiDB:CC1G_03774
Locus tag
CC1G_03774
See related
VEuPathDB:CC1G_03774
Gene type
protein coding
RNA name
ROK1
RefSeq status
PROVISIONAL
Organism
Coprinopsis cinerea okayama7#130 (strain: okayama7#130)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Psathyrellaceae; Coprinopsis
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Genomic context

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See CC1G_03774 in Genome Data Viewer
Location:
chromosome: 1, map: unlocalized
Exon count:
9

NW_003307544.1Genomic Context describing neighboring genes Neighboring gene dicarboxylic acid transporter Neighboring gene galactan 1,3-beta-galactosidase Neighboring gene hypothetical protein Neighboring gene transfer RNA nucleotidyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003307544.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus). Stajich JE, et al. Proc Natl Acad Sci U S A, 2010 Jun 29. PMID 20547848, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
ROK1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003307544.1 Reference assembly

    Range
    2232196..2234491
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001828928.2 → XP_001828980.1  ROK1 [Coprinopsis cinerea okayama7#130]

    See identical proteins and their annotated locations for XP_001828980.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A8N267
    Conserved Domains (1) summary
    COG0513
    Location:102 → 567
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
Nucleotide Protein
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