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AO090102000602 hypothetical protein [ Aspergillus oryzae RIB40 ]

Gene ID: 5994796, updated on 17-May-2024

Summary

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Gene symbol
AO090102000602
Gene description
hypothetical protein
Primary source
FungiDB:AO090102000602
Locus tag
AO090102000602
See related
VEuPathDB:AO090102000602
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus oryzae RIB40 (strain: RIB40)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
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Genomic context

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See AO090102000602 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_036438.1 (2894581..2895899, complement)

Chromosome 4 - NC_036438.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036438.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and analysis of Aspergillus oryzae. Machida M, et al. Nature, 2005 Dec 22. PMID 16372010

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal small subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of preribosome, small subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_001822751.1
  • predicted RNA-binding protein Nob1p involved in 26S proteasome assembly

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_036438.1 Reference assembly

    Range
    2894581..2895899 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001822699.3 → XP_001822751.1  unnamed protein product [Aspergillus oryzae RIB40]

    See identical proteins and their annotated locations for XP_001822751.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1S9DRK5, I8ACU5, Q2U9Z7
    Conserved Domains (3) summary
    PRK13108
    Location:135 → 232
    PRK13108; prolipoprotein diacylglyceryl transferase; Reviewed
    pfam08772
    Location:269 → 339
    NOB1_Zn_bind; Nin one binding (NOB1) Zn-ribbon like
    pfam17146
    Location:14 → 105
    PIN_6; PIN domain of ribonuclease
Nucleotide Protein
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Research Materials