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AO090026000531 hypothetical protein [ Aspergillus oryzae RIB40 ]

Gene ID: 5993996, updated on 17-May-2024

Summary

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Gene symbol
AO090026000531
Gene description
hypothetical protein
Primary source
FungiDB:AO090026000531
Locus tag
AO090026000531
See related
VEuPathDB:AO090026000531
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus oryzae RIB40 (strain: RIB40)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
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Genomic context

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See AO090026000531 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_036437.1 (3627814..3629303, complement)

Chromosome 3 - NC_036437.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036437.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and analysis of Aspergillus oryzae. Machida M, et al. Nature, 2005 Dec 22. PMID 16372010

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cdc73/Paf1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_001821968.1
  • RNA polymerase II assessory factor Cdc73p

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_036437.1 Reference assembly

    Range
    3627814..3629303 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001821916.1 → XP_001821968.1  unnamed protein product [Aspergillus oryzae RIB40]

    See identical proteins and their annotated locations for XP_001821968.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1S9E0G8, I8TUI9, Q2UEP9
    Conserved Domains (2) summary
    COG5157
    Location:32 → 467
    CDC73; RNA polymerase II assessory factor [Transcription]
    pfam05179
    Location:280 → 460
    CDC73_C; RNA pol II accessory factor, Cdc73 family, C-terminal
Nucleotide Protein
Heading Accession and Version

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