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AO090009000292 hypothetical protein [ Aspergillus oryzae RIB40 ]

Gene ID: 5988703, updated on 17-May-2024

Summary

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Gene symbol
AO090009000292
Gene description
hypothetical protein
Primary source
FungiDB:AO090009000292
Locus tag
AO090009000292
See related
VEuPathDB:AO090009000292
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus oryzae RIB40 (strain: RIB40)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
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Genomic context

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See AO090009000292 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_036435.1 (778483..780052)

Chromosome 1 - NC_036435.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036435.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and analysis of Aspergillus oryzae. Machida M, et al. Nature, 2005 Dec 22. PMID 16372010

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytoplasm to vacuole targeting by the Cvt pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_001816773.1
  • membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_036435.1 Reference assembly

    Range
    778483..780052
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001816721.3 → XP_001816773.1  unnamed protein product [Aspergillus oryzae RIB40]

    See identical proteins and their annotated locations for XP_001816773.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    I8TXU1, Q2UUJ4
    Conserved Domains (2) summary
    cd06863
    Location:72 → 189
    PX_Atg24p; The phosphoinositide binding Phox Homology domain of yeast Atg24p, an autophagic degradation protein
    cd07628
    Location:232 → 475
    BAR_Atg24p; The Bin/Amphiphysin/Rvs (BAR) domain of yeast Sorting Nexin Atg24p
Nucleotide Protein
Heading Accession and Version

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Research Materials