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SNOG_00270 hypothetical protein [ Parastagonospora nodorum SN15 ]

Gene ID: 5967982, updated on 16-Nov-2023

Summary

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Gene symbol
SNOG_00270
Gene description
hypothetical protein
Locus tag
SNOG_00270
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Parastagonospora nodorum SN15 (strain: SN15)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Phaeosphaeriaceae; Parastagonospora
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Genomic context

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See SNOG_00270 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
2

NW_001884549.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001884549.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Dothideomycete plant interactions illuminated by genome sequencing and EST analysis of the wheat pathogen Stagonospora nodorum. Hane JK, et al. Plant Cell, 2007 Nov. PMID 18024570, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

  • gene prediction version 2

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipoate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipoate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_001790961.1
  • gene prediction version 2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001884549.1 Reference assembly

    Range
    647941..649210 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001790909.1 → XP_001790961.1  hypothetical protein SNOG_00270 [Parastagonospora nodorum SN15]

    See identical proteins and their annotated locations for XP_001790961.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q0V6U4
    UniProtKB/TrEMBL
    A0A7U2EPU2
    Conserved Domains (3) summary
    cd01335
    Location:125 → 335
    Radical_SAM; Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. ...
    PLN02428
    Location:12 → 363
    PLN02428; lipoic acid synthase
    pfam16881
    Location:25 → 102
    LIAS_N; N-terminal domain of lipoyl synthase of Radical_SAM family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0V6U4.2

Gene LinkOut

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Molecular Biology Databases