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LOC589863 aldose 1-epimerase [ Strongylocentrotus purpuratus (purple sea urchin) ]

Gene ID: 589863, updated on 14-Dec-2023

Summary

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Gene symbol
LOC589863
Gene description
aldose 1-epimerase
Gene type
protein coding
RefSeq status
MODEL
Organism
Strongylocentrotus purpuratus
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145611.1 (2907564..2918005, complement)
Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003579208.1 (22315..31385)

NW_022145611.1Genomic Context describing neighboring genes Neighboring gene aldose 1-epimerase-like Neighboring gene aldose 1-epimerase-like Neighboring gene solute carrier family 30 member 6 Neighboring gene uncharacterized LOC115929451 Neighboring gene retinol dehydrogenase 14-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. Tu Q, et al. Genome Res, 2012 Oct. PMID 22709795, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aldose 1-epimerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactose catabolic process via UDP-galactose IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aldose 1-epimerase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Spur_5.0 Primary Assembly

Genomic

  1. NW_022145611.1 Reference Spur_5.0 Primary Assembly

    Range
    2907564..2918005 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_789494.5 → XP_794587.4  aldose 1-epimerase

    UniProtKB/TrEMBL
    A0A7M7T4Z5
    Conserved Domains (1) summary
    cd09019
    Location:19 → 339
    galactose_mutarotase_like; galactose mutarotase_like

  2. XM_030998373.1 → XP_030854233.1  aldose 1-epimerase

    UniProtKB/TrEMBL
    A0A7M7T4Z5
    Conserved Domains (1) summary
    cd09019
    Location:19 → 339
    galactose_mutarotase_like; galactose mutarotase_like
Nucleotide Protein
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