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slc9a8 solute carrier family 9 member A8 [ Strongylocentrotus purpuratus (purple sea urchin) ]

Gene ID: 578765, updated on 14-Dec-2023

Summary

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Symbol
slc9a8
Full Name
solute carrier family 9 member A8
Primary source
EchinoBase:ECB-GENE-23188160
Gene type
protein coding
RefSeq status
MODEL
Organism
Strongylocentrotus purpuratus
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145614.1 (31916432..31945544, complement)
Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003577394.1 (669054..695009, complement)

NW_022145614.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100891702 Neighboring gene alpha-crystallin B chain Neighboring gene eukaryotic translation initiation factor 2 subunit beta Neighboring gene RNA-binding protein 39

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. Tu Q, et al. Genome Res, 2012 Oct. PMID 22709795, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sodium:proton antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of pH IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium/hydrogen exchanger 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Spur_5.0 Primary Assembly

Genomic

  1. NW_022145614.1 Reference Spur_5.0 Primary Assembly

    Range
    31916432..31945544 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030975138.1 → XP_030830998.1  sodium/hydrogen exchanger 8 isoform X1

    UniProtKB/TrEMBL
    A0A7M7N474
    Conserved Domains (1) summary
    TIGR00840
    Location:106 → 591
    b_cpa1; sodium/hydrogen exchanger 3

  2. XM_778917.5 → XP_784010.4  sodium/hydrogen exchanger 8 isoform X2

    UniProtKB/TrEMBL
    A0A7M7REB0
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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