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GL50803_0029436 DNA-directed RNA polymerase subunit B [ Giardia intestinalis ]

Gene ID: 5701849, updated on 17-May-2024

Summary

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Gene symbol
GL50803_0029436
Gene description
DNA-directed RNA polymerase subunit B
Primary source
GiardiaDB:GL50803_0029436
Locus tag
GL50803_0029436
See related
VEuPathDB:GL50803_0029436
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Giardia intestinalis (strain: WB C6, culture-collection: ATCC:50803)
Lineage
Eukaryota; Metamonada; Diplomonadida; Hexamitidae; Giardiinae; Giardia
Old locus tag
GL50803_29436
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Genomic context

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See GL50803_0029436 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_051860.1 (2220495..2224202, complement)

Chromosome 5 - NC_051860.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene Ankyrin repeat protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051860.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic minimalism in the early diverging intestinal parasite Giardia lamblia. Morrison HG, et al. Science, 2007 Sep 28. PMID 17901334

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribonucleoside binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerase subunit B

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_051860.1 Reference assembly

    Range
    2220495..2224202 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001708879.1 → XP_001708931.1  DNA-directed RNA polymerase subunit B [Giardia intestinalis]

    See identical proteins and their annotated locations for XP_001708931.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A8B827, V6TBS9
    Conserved Domains (2) summary
    cd00653
    Location:54 → 1230
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam06883
    Location:577 → 628
    RNA_pol_Rpa2_4; RNA polymerase I, Rpa2 specific domain
Nucleotide Protein
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