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klhdc4 kelch domain containing 4 [ Danio rerio (zebrafish) ]

Gene ID: 569887, updated on 12-Sep-2024

Summary

Official Symbol
klhdc4provided by ZNC
Official Full Name
kelch domain containing 4provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-2057
See related
Ensembl:ENSDARG00000100206 AllianceGenome:ZFIN:ZDB-GENE-030131-2057
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fb95f04; wu:fb95f04
Summary
Orthologous to human KLHDC4 (kelch domain containing 4). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
chromosome: 25
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 25 NC_007136.7 (12707522..12730260, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 25 NC_007136.6 (12611017..12633755, complement)

Chromosome 25 - NC_007136.7Genomic Context describing neighboring genes Neighboring gene zinc finger, CCHC domain containing 14 Neighboring gene junctophilin 3b Neighboring gene solute carrier family 7 member 5 Neighboring gene carbonic anhydrase Va

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
kelch domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001126430.1NP_001119902.1  kelch domain-containing protein 4

    Status: PROVISIONAL

    Source sequence(s)
    AL928934
    UniProtKB/TrEMBL
    A0A0R4IHX2, A0A8M1NGR3
    Related
    ENSDARP00000134354.1, ENSDART00000171834.2
    Conserved Domains (3) summary
    sd00038
    Location:64115
    Kelch; KELCH repeat [structural motif]
    pfam13415
    Location:131184
    Kelch_3; Galactose oxidase, central domain
    pfam13418
    Location:63117
    Kelch_4; Galactose oxidase, central domain

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007136.7 Reference GRCz11 Primary Assembly

    Range
    12707522..12730260 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018395190.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    16825..39563 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)