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LMJF_31_2970 putative acetyl-CoA carboxylase [ Leishmania major strain Friedlin ]

Gene ID: 5654235, updated on 21-Dec-2023

Summary

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Gene symbol
LMJF_31_2970
Gene description
putative acetyl-CoA carboxylase
Locus tag
LMJF_31_2970
Gene type
protein coding
RNA name
putative acetyl-CoA carboxylase
RefSeq status
PROVISIONAL
Organism
Leishmania major strain Friedlin (strain: Friedlin)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
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Genomic context

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Location:
chromosome: 31
Exon count:
1
Sequence:
Chromosome: 31; NC_007272.2 (1395180..1401686, complement)

Chromosome 31 - NC_007272.2Genomic Context describing neighboring genes Neighboring gene mutt/nudix family protein-like protein Neighboring gene putative serine/threonine-protein kinase Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007272.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the kinetoplastid parasite, Leishmania major. Ivens AC, et al. Science, 2005 Jul 15. PMID 16020728, Free PMC Article
  2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables acetyl-CoA carboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
putative acetyl-CoA carboxylase
XP_001685287.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007272.2 Reference assembly

    Range
    1395180..1401686 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001685235.1 → XP_001685287.1  putative acetyl-CoA carboxylase [Leishmania major strain Friedlin]

    See identical proteins and their annotated locations for XP_001685287.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q4Q5W1
    Conserved Domains (4) summary
    cd06850
    Location:664 → 728
    biotinyl_domain; The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase, ...
    COG0439
    Location:31 → 528
    AccC; Biotin carboxylase [Lipid transport and metabolism]
    pfam01039
    Location:1515 → 2046
    Carboxyl_trans; Carboxyl transferase domain
    pfam08326
    Location:832 → 1329
    ACC_central; Acetyl-CoA carboxylase, central region
Nucleotide Protein
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