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MGC174155 Cathepsin L1-like [ Danio rerio (zebrafish) ]

Gene ID: 564906, updated on 27-Mar-2024

Summary

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Gene symbol
MGC174155
Gene description
Cathepsin L1-like
See related
Ensembl:ENSDARG00000087651
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
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Genomic context

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See MGC174155 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
8
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (16717938..16720432, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (16596064..16598558, complement)

Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene si:dkey-239j18.3 Neighboring gene wu:fa26c03 Neighboring gene wu:fb36g12 Neighboring gene zgc:174154

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
Cathepsin L1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001103118.1 → NP_001096588.1  Cathepsin L1-like precursor

    See identical proteins and their annotated locations for NP_001096588.1

    Status: PROVISIONAL

    Source sequence(s)
    BC152236
    UniProtKB/TrEMBL
    A0A8M1NFL9, A7MCM3, A8E587
    Related
    ENSDARP00000126964.1, ENSDART00000152154.3
    Conserved Domains (2) summary
    smart00848
    Location:28 → 86
    Inhibitor_I29; Cathepsin propeptide inhibitor domain (I29)
    pfam00112
    Location:115 → 334
    Peptidase_C1; Papain family cysteine protease

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007123.7 Reference GRCz11 Primary Assembly

    Range
    16717938..16720432 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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