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LOC5580194 plastin-1 [ Aedes aegypti (yellow fever mosquito) ]

Gene ID: 5580194, updated on 10-May-2024

Summary

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Gene symbol
LOC5580194
Gene description
plastin-1
See related
VectorBase:AAEL002539
Gene type
protein coding
RefSeq status
MODEL
Organism
Aedes aegypti
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Aedini; Aedes; Stegomyia
Also known as
AAEL002539
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
101 current AaegL5.0 (GCF_002204515.2) 1 NC_035107.1 (226259364..226467135)

Chromosome 1 - NC_035107.1Genomic Context describing neighboring genes Neighboring gene dipeptidase 2 Neighboring gene THO complex subunit 1 Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene transfer RNA leucine (anticodon CAA) Neighboring gene transfer RNA leucine (anticodon CAA) Neighboring gene transfer RNA leucine (anticodon CAA) Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene transfer RNA leucine (anticodon CAA) Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene transfer RNA leucine (anticodon CAA) Neighboring gene uncharacterized LOC5580193 Neighboring gene DNA topoisomerase I, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_035107.1 Chromosome 1 Reference AaegL5.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The neurotranscriptome of the Aedes aegypti mosquito. Matthews BJ, et al. BMC Genomics, 2016 Jan 6. PMID 26738925, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament bundle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in actin filament network formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin filament bundle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plastin-1
Names
fimbrin/plastin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aedes aegypti Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AaegL5.0 Primary Assembly

Genomic

  1. NC_035107.1 Reference AaegL5.0 Primary Assembly

    Range
    226259364..226467135
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021857713.1 → XP_021713405.1  plastin-1 isoform X1

    UniProtKB/TrEMBL
    A0A6I8T6J3, Q17HT7
    Conserved Domains (1) summary
    COG5069
    Location:23 → 619
    SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]

  2. XM_001655565.2 → XP_001655615.2  plastin-1 isoform X2

    UniProtKB/TrEMBL
    A0A1S4F211, Q17HT7
    Conserved Domains (1) summary
    COG5069
    Location:13 → 618
    SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
Nucleotide Protein Strain
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