U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC5576239 protein patched [ Aedes aegypti (yellow fever mosquito) ]

Gene ID: 5576239, updated on 10-May-2024

Summary

Go to the top of the page Help
Gene symbol
LOC5576239
Gene description
protein patched
See related
VectorBase:AAEL002850
Gene type
protein coding
RefSeq status
MODEL
Organism
Aedes aegypti
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Aedini; Aedes; Stegomyia
Also known as
AAEL002850
Orthologs
fruit fly all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC5576239 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
101 current AaegL5.0 (GCF_002204515.2) 3 NC_035109.1 (233683279..233767781, complement)

Chromosome 3 - NC_035109.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC5576241 Neighboring gene nischarin Neighboring gene uncharacterized LOC110679708 Neighboring gene uncharacterized LOC110678671 Neighboring gene uncharacterized LOC110679254

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_035109.1 Chromosome 3 Reference AaegL5.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The neurotranscriptome of the Aedes aegypti mosquito. Matthews BJ, et al. BMC Genomics, 2016 Jan 6. PMID 26738925, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hedgehog family protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hedgehog receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables smoothened binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in smoothened signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein patched
Names
patched 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Aedes aegypti Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AaegL5.0 Primary Assembly

Genomic

  1. NC_035109.1 Reference AaegL5.0 Primary Assembly

    Range
    233683279..233767781 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001655967.2 → XP_001656017.2  protein patched

    UniProtKB/TrEMBL
    A0A1S4F2W9, Q17GY7
    Conserved Domains (1) summary
    cl25655
    Location:20 → 1102
    Patched; Patched family
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials