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LOC5575834 tetratricopeptide repeat protein 21B [ Aedes aegypti (yellow fever mosquito) ]

Gene ID: 5575834, updated on 23-Mar-2024

Summary

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Gene symbol
LOC5575834
Gene description
tetratricopeptide repeat protein 21B
See related
VectorBase:AAEL012104
Gene type
protein coding
RefSeq status
MODEL
Organism
Aedes aegypti
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Aedini; Aedes; Stegomyia
Also known as
AAEL012104
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Genomic context

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See LOC5575834 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
101 current AaegL5.0 (GCF_002204515.2) 1 NC_035107.1 (178359..182727, complement)

Chromosome 1 - NC_035107.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110674706 Neighboring gene synaptic vesicle glycoprotein 2C Neighboring gene loss of visual transmission Neighboring gene uncharacterized LOC5575833 Neighboring gene aminopeptidase N

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_035107.1 Chromosome 1 Reference AaegL5.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intraciliary retrograde transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of intraciliary transport particle A IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetratricopeptide repeat protein 21B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aedes aegypti Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AaegL5.0 Primary Assembly

Genomic

  1. NC_035107.1 Reference AaegL5.0 Primary Assembly

    Range
    178359..182727 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001655809.2 → XP_001655859.2  tetratricopeptide repeat protein 21B isoform X2

    UniProtKB/TrEMBL
    A0A903UR77, Q16N31
    Conserved Domains (2) summary
    sd00006
    Location:693 → 722
    TPR; TPR repeat [structural motif]
    cl26002
    Location:314 → 1007
    TPR_11; TPR repeat

  2. XM_021838751.1 → XP_021694443.1  tetratricopeptide repeat protein 21B isoform X1

    UniProtKB/TrEMBL
    A0A6I8TEF0, Q16N31
    Conserved Domains (2) summary
    sd00006
    Location:693 → 722
    TPR; TPR repeat [structural motif]
    cl26002
    Location:314 → 1008
    TPR_11; TPR repeat
Nucleotide Protein Strain
Heading Accession and Version

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