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LOC5564837 lanC-like protein 3 homolog [ Aedes aegypti (yellow fever mosquito) ]

Gene ID: 5564837, updated on 23-Mar-2024

Summary

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Gene symbol
LOC5564837
Gene description
lanC-like protein 3 homolog
See related
VectorBase:AAEL018022
Gene type
protein coding
RefSeq status
MODEL
Organism
Aedes aegypti
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Aedini; Aedes; Stegomyia
Also known as
GPRNNB2; AAEL000602
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Genomic context

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See LOC5564837 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
101 current AaegL5.0 (GCF_002204515.2) 2 NC_035108.1 (285111642..285145311)

Chromosome 2 - NC_035108.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat protein 14 homolog Neighboring gene uncharacterized LOC110676628 Neighboring gene Adenylate kinase 3 Neighboring gene uncharacterized LOC5564850 Neighboring gene nose resistant to fluoxetine protein 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_035108.1 Chromosome 2 Reference AaegL5.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The neurotranscriptome of the Aedes aegypti mosquito. Matthews BJ, et al. BMC Genomics, 2016 Jan 6. PMID 26738925, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptide modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lanC-like protein 3 homolog; uncharacterized protein LOC5564837

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aedes aegypti Annotation Release 101

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AaegL5.0 Primary Assembly

Genomic

  1. NC_035108.1 Reference AaegL5.0 Primary Assembly

    Range
    285111642..285145311
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021845250.1 → XP_021700942.1  lanC-like protein 3 homolog isoform X2

    UniProtKB/TrEMBL
    A0A0P6IW80, Q17NS4
    Conserved Domains (1) summary
    cd04794
    Location:55 → 407
    euk_LANCL; Eukaryotic Lanthionine synthetase C-like protein

  2. XM_001649118.3 → XP_001649168.3  lanC-like protein 3 homolog isoform X2

    UniProtKB/TrEMBL
    A0A0P6IW80, Q17NS4
    Conserved Domains (1) summary
    cd04794
    Location:55 → 407
    euk_LANCL; Eukaryotic Lanthionine synthetase C-like protein

  3. XM_021845249.1 → XP_021700941.1  uncharacterized protein LOC5564837 isoform X1

    UniProtKB/TrEMBL
    A0A1S4G6K4
    Conserved Domains (1) summary
    pfam05225
    Location:14 → 53
    HTH_psq; helix-turn-helix, Psq domain

RNA

  1. XR_002500582.1 RNA Sequence

  2. XR_002500579.1 RNA Sequence

  3. XR_002500580.1 RNA Sequence

  4. XR_002500581.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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