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LOC5563881 protein CBFA2T2 [ Aedes aegypti (yellow fever mosquito) ]

Gene ID: 5563881, updated on 10-May-2024

Summary

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Gene symbol
LOC5563881
Gene description
protein CBFA2T2
See related
VectorBase:AAEL014203
Gene type
protein coding
RefSeq status
MODEL
Organism
Aedes aegypti
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Aedini; Aedes; Stegomyia
Also known as
nervy; AAEL014203
Orthologs
fruit fly all
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Genomic context

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See LOC5563881 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
101 current AaegL5.0 (GCF_002204515.2) 3 NC_035109.1 (301564432..301941839, complement)

Chromosome 3 - NC_035109.1Genomic Context describing neighboring genes Neighboring gene sodium-dependent nutrient amino acid transporter 1 Neighboring gene prostaglandin reductase 1 Neighboring gene sodium-dependent nutrient amino acid transporter 1 Neighboring gene 6-phosphogluconolactonase Neighboring gene transfer RNA serine (anticodon AGA) Neighboring gene transfer RNA alanine (anticodon GGC) Neighboring gene proton-associated sugar transporter A Neighboring gene Fatty acid transport protein 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_035109.1 Chromosome 3 Reference AaegL5.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The neurotranscriptome of the Aedes aegypti mosquito. Matthews BJ, et al. BMC Genomics, 2016 Jan 6. PMID 26738925, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein CBFA2T2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aedes aegypti Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AaegL5.0 Primary Assembly

Genomic

  1. NC_035109.1 Reference AaegL5.0 Primary Assembly

    Range
    301564432..301941839 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021855228.1 → XP_021710920.1  protein CBFA2T2 isoform X2

    UniProtKB/TrEMBL
    A0A6I8TPK1, Q16H02
    Conserved Domains (4) summary
    pfam01753
    Location:530 → 566
    zf-MYND; MYND finger
    pfam07531
    Location:141 → 226
    TAFH; NHR1 homology to TAF
    pfam08788
    Location:404 → 432
    NHR2; NHR2 domain like
    cl28522
    Location:449 → 499
    AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]

  2. XM_021855227.1 → XP_021710919.1  protein CBFA2T2 isoform X1

    UniProtKB/TrEMBL
    A0A903UX33, Q16H02
    Conserved Domains (4) summary
    pfam01753
    Location:534 → 570
    zf-MYND; MYND finger
    pfam07531
    Location:141 → 226
    TAFH; NHR1 homology to TAF
    pfam08788
    Location:404 → 432
    NHR2; NHR2 domain like
    cl28522
    Location:449 → 499
    AtpF; FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]

RNA

  1. XR_002502708.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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