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LOC552847 ubiquitin domain-containing protein 1 [ Apis mellifera (honey bee) ]

Gene ID: 552847, updated on 10-May-2024

Summary

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Gene symbol
LOC552847
Gene description
ubiquitin domain-containing protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
Also known as
GB50145
Orthologs
fruit fly all
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Genomic context

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See LOC552847 in Genome Data Viewer
Location:
chromosome: LG15
Exon count:
5
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG15 NC_037652.1 (6221539..6223660)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG15 NC_007084.3 (6665086..6667168)

Linkage Group LG15 - NC_037652.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102656440 Neighboring gene pantothenate kinase 3 fbl Neighboring gene MORN repeat-containing protein 4 homolog Neighboring gene MMS19 nucleotide excision repair protein Neighboring gene cytochrome c oxidase assembly protein COX15 homolog Neighboring gene xaa-Pro aminopeptidase ApepP Neighboring gene PRADC1-like protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037652.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    6221539..6223660
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_625223.5 → XP_625226.1  ubiquitin domain-containing protein 1

    See identical proteins and their annotated locations for XP_625226.1

    UniProtKB/TrEMBL
    A0A7M7TFZ5, A0A8B9B579
    Conserved Domains (2) summary
    cd01794
    Location:158 → 227
    Ubl_UBTD; ubiquitin-like (Ubl) domain found in ubiquitin domain-containing proteins UBTD1, UBTD2, and similar proteins
    pfam16455
    Location:35 → 136
    UBD; Ubiquitin-binding domain
Nucleotide Protein Strain
Heading Accession and Version

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