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LOC5525170 phosphatidylinositol-glycan-specific phospholipase D [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5525170, updated on 30-Nov-2023

Summary

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Gene symbol
LOC5525170
Gene description
phosphatidylinositol-glycan-specific phospholipase D
Locus tag
NEMVEDRAFT_v1g224736
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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See LOC5525170 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
12
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 9 NC_064042.1 (1385719..1393683, complement)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001829155.1 (372..6653)

Chromosome 9 - NC_064042.1Genomic Context describing neighboring genes Neighboring gene flocculation protein FLO11-like Neighboring gene glycerol-3-phosphate phosphatase-like Neighboring gene excitatory amino acid transporter 3 Neighboring gene uncharacterized LOC125572463 Neighboring gene dixin Neighboring gene phospholipid-transporting ATPase IF

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosylphosphatidylinositol phospholipase D activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor release IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol-glycan-specific phospholipase D
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064042.1 Reference jaNemVect1.1

    Range
    1385719..1393683 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048732979.1 → XP_048588936.1  phosphatidylinositol-glycan-specific phospholipase D

Nucleotide Protein
Heading Accession and Version

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