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LOC552148 thymidylate kinase [ Apis mellifera (honey bee) ]

Gene ID: 552148, updated on 2-Oct-2024

Summary

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Gene symbol
LOC552148
Gene description
thymidylate kinase
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
Also known as
GB51913
Orthologs
fruit fly all
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Genomic context

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See LOC552148 in Genome Data Viewer
Location:
chromosome: LG3
Exon count:
4
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG3 NC_037640.1 (2309685..2310830, complement)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG3 NC_007072.3 (974604..975706, complement)

Linkage Group LG3 - NC_037640.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100577721 Neighboring gene putative uncharacterized protein DDB_G0286901 Neighboring gene Secretory 16 Neighboring gene vesicle-trafficking protein SEC22

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. Shelomi M, et al. BMC Genomics, 2014 Oct 21. PMID 25331961, Free PMC Article
  2. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
  3. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
  4. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article
  5. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UMP/dUMP kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thymidylate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dTDP biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dTTP biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dUDP biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thymidylate kinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037640.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    2309685..2310830 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006557994.3 → XP_006558057.1  thymidylate kinase isoform X2

    UniProtKB/TrEMBL
    A0A7M7GP59, A0A8B6YR80
    Conserved Domains (1) summary
    cl17190
    Location:2 → 186
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

  2. XM_624527.6 → XP_624530.3  thymidylate kinase isoform X1

    UniProtKB/TrEMBL
    A0A7M7RB97, A0A8B9B2D9
    Conserved Domains (1) summary
    cl17190
    Location:5 → 210
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
Nucleotide Protein Strain
Heading Accession and Version

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