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LOC5520974 pyridoxal phosphate homeostasis protein [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5520974, updated on 30-Nov-2023

Summary

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Gene symbol
LOC5520974
Gene description
pyridoxal phosphate homeostasis protein
Locus tag
NEMVEDRAFT_v1g178404
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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See LOC5520974 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
8
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 6 NC_064039.1 (13274276..13280915)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834408.1 (1451309..1459442)

Chromosome 6 - NC_064039.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116604169 Neighboring gene retinoschisin Neighboring gene testis-expressed protein 36 Neighboring gene retinoschisin Neighboring gene type-2 angiotensin II receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pyridoxal phosphate homeostasis protein
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064039.1 Reference jaNemVect1.1

    Range
    13274276..13280915
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001640731.3 → XP_001640781.2  pyridoxal phosphate homeostasis protein

    UniProtKB/TrEMBL
    A7RIJ0
    Conserved Domains (1) summary
    cd06822
    Location:14 → 245
    PLPDE_III_YBL036c_euk; Pyridoxal 5-phosphate (PLP)-binding TIM barrel domain of Type III PLP-Dependent Enzymes, Eukaryotic YBL036c-like proteins
Nucleotide Protein
Heading Accession and Version

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