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LOC5520019 V-type proton ATPase subunit C [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5520019, updated on 30-Nov-2023

Summary

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Gene symbol
LOC5520019
Gene description
V-type proton ATPase subunit C
Locus tag
NEMVEDRAFT_v1g160000
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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See LOC5520019 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 3 NC_064036.1 (12236224..12243311)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834403.1 (1454814..1461428)

Chromosome 3 - NC_064036.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125561335 Neighboring gene MOB kinase activator-like 3 Neighboring gene CWF19-like protein 1 Neighboring gene 40S ribosomal protein S11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase, V1 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase subunit C
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064036.1 Reference jaNemVect1.1

    Range
    12236224..12243311
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032364882.2 → XP_032220773.1  V-type proton ATPase subunit C

    UniProtKB/TrEMBL
    A7RL79
    Conserved Domains (1) summary
    pfam03223
    Location:5 → 369
    V-ATPase_C; V-ATPase subunit C
Nucleotide Protein
Heading Accession and Version

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