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LOC5519289 C2 domain-containing protein 3 [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5519289, updated on 30-Nov-2023

Summary

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Gene symbol
LOC5519289
Gene description
C2 domain-containing protein 3
Locus tag
NEMVEDRAFT_v1g199696
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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See LOC5519289 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
35
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 10 NC_064043.1 (9775974..9818368)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834398.1 (1608053..1656075, complement)

Chromosome 10 - NC_064043.1Genomic Context describing neighboring genes Neighboring gene proton-coupled amino acid transporter 1 Neighboring gene proton-coupled amino acid transporter 1 Neighboring gene coiled-coil domain-containing protein 22 homolog Neighboring gene substance-K receptor Neighboring gene uncharacterized LOC125572982 Neighboring gene lactadherin Neighboring gene U3 small nucleolar RNA-associated protein 18 homolog Neighboring gene fibrillin-2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in centriole elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centriolar satellite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C2 domain-containing protein 3
Names
dentin sialophosphoprotein
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064043.1 Reference jaNemVect1.1

    Range
    9775974..9818368
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048733234.1 → XP_048589191.1  C2 domain-containing protein 3 isoform X1

  2. XM_048733235.1 → XP_048589192.1  C2 domain-containing protein 3 isoform X2

  3. XM_048733236.1 → XP_048589193.1  C2 domain-containing protein 3 isoform X3

Nucleotide Protein
Heading Accession and Version

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