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LOC551817 putative peptidyl-prolyl cis-trans isomerase dodo [ Apis mellifera (honey bee) ]

Gene ID: 551817, updated on 9-Nov-2023

Summary

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Gene symbol
LOC551817
Gene description
putative peptidyl-prolyl cis-trans isomerase dodo
Gene type
protein coding
RefSeq status
MODEL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
Also known as
parv1; GB45376
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Genomic context

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See LOC551817 in Genome Data Viewer
Location:
chromosome: LG6
Exon count:
3
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG6 NC_037643.1 (16815040..16816705)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG6 NC_007075.3 (16397452..16399102, complement)

Linkage Group LG6 - NC_037643.1Genomic Context describing neighboring genes Neighboring gene rhomboid family intramembrane serine protease rho-7 Neighboring gene S-formylglutathione hydrolase Neighboring gene uncharacterized LOC102656430 Neighboring gene glutamine synthetase 2 Neighboring gene surfeit locus protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
  2. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
  3. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-prolyl cis-trans isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative peptidyl-prolyl cis-trans isomerase dodo
Names
parvulin prolyl isomerase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037643.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    16815040..16816705
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_624202.5 → XP_624205.2  putative peptidyl-prolyl cis-trans isomerase dodo

    UniProtKB/TrEMBL
    A0A7M7TFX4, A0A8B9B4D0
    Conserved Domains (2) summary
    PTZ00356
    Location:49 → 162
    PTZ00356; peptidyl-prolyl cis-trans isomerase (PPIase); Provisional
    pfam00397
    Location:6 → 36
    WW; WW domain
Nucleotide Protein Strain
Heading Accession and Version

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