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LOC5518038 procathepsin L [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5518038, updated on 30-Nov-2023

Summary

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Gene symbol
LOC5518038
Gene description
procathepsin L
Locus tag
NEMVEDRAFT_v1g228590
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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See LOC5518038 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
5
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 13 NC_064046.1 (5073370..5076432, complement)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834389.1 (1138335..1142602)

Chromosome 13 - NC_064046.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC5516021 Neighboring gene uncharacterized protein K02A2.6 Neighboring gene procathepsin L-like Neighboring gene uncharacterized LOC125559120

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis involved in protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
procathepsin L
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064046.1 Reference jaNemVect1.1

    Range
    5073370..5076432 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001637966.3 → XP_001638016.2  procathepsin L

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases