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LOC5514746 DDB1- and CUL4-associated factor 13 [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5514746, updated on 30-Nov-2023

Summary

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Gene symbol
LOC5514746
Gene description
DDB1- and CUL4-associated factor 13
Locus tag
NEMVEDRAFT_v1g234715
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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See LOC5514746 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
11
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 11 NC_064044.1 (12266238..12277684, complement)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834360.1 (601486..608585, complement)

Chromosome 11 - NC_064044.1Genomic Context describing neighboring genes Neighboring gene extracellular calcium-sensing receptor Neighboring gene extracellular calcium-sensing receptor Neighboring gene trichohyalin-like Neighboring gene uncharacterized LOC116619498 Neighboring gene protein LKAAEAR1 Neighboring gene uncharacterized LOC116619476

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DDB1- and CUL4-associated factor 13
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064044.1 Reference jaNemVect1.1

    Range
    12266238..12277684 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001634870.3 → XP_001634920.2  DDB1- and CUL4-associated factor 13

RNA

  1. XR_007314216.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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