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LOC5513895 intermembrane lipid transfer protein VPS13A-like [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5513895, updated on 30-Nov-2023

Summary

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Gene symbol
LOC5513895
Gene description
intermembrane lipid transfer protein VPS13A-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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See LOC5513895 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
120
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 14 NC_064047.1 (5530549..5675989)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834351.1 (821798..871968, complement)

Chromosome 14 - NC_064047.1Genomic Context describing neighboring genes Neighboring gene intermembrane lipid transfer protein VPS13A-like Neighboring gene solute carrier family 28 member 3-like Neighboring gene tetratricopeptide repeat protein 28 Neighboring gene kinesin-like protein KIF25 Neighboring gene transfer RNA asparagine (anticodon AUU) Neighboring gene uncharacterized LOC116619069

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein retention in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein targeting to vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extrinsic component of membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
intermembrane lipid transfer protein VPS13A-like
Names
predicted protein
vacuolar protein sorting-associated protein 13A
vacuolar protein sorting-associated protein 13C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064047.1 Reference jaNemVect1.1

    Range
    5530549..5675989
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048721947.1 → XP_048577904.1  intermembrane lipid transfer protein VPS13A-like isoform X1

  2. XM_048721948.1 → XP_048577905.1  intermembrane lipid transfer protein VPS13A-like isoform X2

Nucleotide Protein
Heading Accession and Version

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