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LOC5513889 acetylcholine receptor subunit alpha-type acr-16 [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5513889, updated on 30-Nov-2023

Summary

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Gene symbol
LOC5513889
Gene description
acetylcholine receptor subunit alpha-type acr-16
Locus tag
NEMVEDRAFT_v1g60450
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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See LOC5513889 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
9
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 14 NC_064047.1 (5788450..5802136)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834351.1 (670287..680902, complement)

Chromosome 14 - NC_064047.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116619061 Neighboring gene superoxide dismutase [Cu-Zn], chloroplastic Neighboring gene golgin subfamily A member 6-like protein 22 Neighboring gene uncharacterized LOC125559844 Neighboring gene neuronal acetylcholine receptor subunit alpha-7 Neighboring gene neuronal acetylcholine receptor subunit alpha-10 Neighboring gene uncharacterized LOC125559845

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular ligand-gated monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neurotransmitter receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetylcholine receptor subunit alpha-type acr-16
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064047.1 Reference jaNemVect1.1

    Range
    5788450..5802136
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001634085.3 → XP_001634135.3  acetylcholine receptor subunit alpha-type acr-16

Nucleotide Protein
Heading Accession and Version

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