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LOC5513581 tubulin alpha-1A chain [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5513581, updated on 30-Nov-2023

Summary

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Gene symbol
LOC5513581
Gene description
tubulin alpha-1A chain
Locus tag
NEMVEDRAFT_v1g242597
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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See LOC5513581 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
5
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 10 NC_064043.1 (8932552..8935094, complement)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834347.1 (464730..467267, complement)

Chromosome 10 - NC_064043.1Genomic Context describing neighboring genes Neighboring gene anoctamin-7 Neighboring gene protease Do-like 10, mitochondrial Neighboring gene fat-like cadherin-related tumor suppressor homolog Neighboring gene uncharacterized LOC5513583 Neighboring gene uncharacterized LOC5513540

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tubulin alpha-1A chain
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064043.1 Reference jaNemVect1.1

    Range
    8932552..8935094 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001633779.3 → XP_001633829.1  tubulin alpha-1A chain

    See identical proteins and their annotated locations for XP_001633829.1

    UniProtKB/TrEMBL
    A7S3G2, A7S699
    Conserved Domains (2) summary
    PTZ00335
    Location:1 → 440
    PTZ00335; tubulin alpha chain; Provisional
    cd02186
    Location:2 → 435
    alpha_tubulin; The alpha-tubulin family
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases