U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC5510553 choline dehydrogenase, mitochondrial [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5510553, updated on 30-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC5510553
Gene description
choline dehydrogenase, mitochondrial
Locus tag
NEMVEDRAFT_v1g112198
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC5510553 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
10
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 6 NC_064039.1 (1169848..1219774, complement)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834304.1 (601137..651807, complement)

Chromosome 6 - NC_064039.1Genomic Context describing neighboring genes Neighboring gene protein RRP5 homolog Neighboring gene uncharacterized LOC5510561 Neighboring gene RCC1 domain-containing protein 1 Neighboring gene microtubule-associated protein 9 Neighboring gene uncharacterized LOC5503347

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycine betaine biosynthetic process from choline IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
choline dehydrogenase, mitochondrial
Names
predicted protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064039.1 Reference jaNemVect1.1

    Range
    1169848..1219774 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048729509.1 → XP_048585466.1  choline dehydrogenase, mitochondrial

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases