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LOC5509833 cAMP-dependent protein kinase type II regulatory subunit [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5509833, updated on 30-Nov-2023

Summary

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Gene symbol
LOC5509833
Gene description
cAMP-dependent protein kinase type II regulatory subunit
Locus tag
NEMVEDRAFT_v1g169332
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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See LOC5509833 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 1 NC_064034.1 (2719585..2732655)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834290.1 (366706..384892, complement)

Chromosome 1 - NC_064034.1Genomic Context describing neighboring genes Neighboring gene POTE ankyrin domain family member B3 Neighboring gene 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 Neighboring gene thioredoxin reductase 1, cytoplasmic Neighboring gene uncharacterized protein C12orf56

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cAMP-dependent protein kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cAMP-dependent protein kinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cAMP-dependent protein kinase type II regulatory subunit
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064034.1 Reference jaNemVect1.1

    Range
    2719585..2732655
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032378810.2 → XP_032234701.2  cAMP-dependent protein kinase type II regulatory subunit isoform X4

  2. XM_032378809.2 → XP_032234700.1  cAMP-dependent protein kinase type II regulatory subunit isoform X2

    Conserved Domains (1) summary
    cd00038
    Location:225 → 341
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  3. XM_048725140.1 → XP_048581097.1  cAMP-dependent protein kinase type II regulatory subunit isoform X3

  4. XM_001630275.3 → XP_001630325.1  cAMP-dependent protein kinase type II regulatory subunit isoform X1

    See identical proteins and their annotated locations for XP_001630325.1

    UniProtKB/TrEMBL
    A7SDH8
    Conserved Domains (3) summary
    cd12099
    Location:5 → 40
    DD_RII_PKA; Dimerization/Docking domain of the Type II Regulatory subunit of cAMP-dependent protein kinase
    COG0664
    Location:248 → 359
    Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
    cd00038
    Location:254 → 370
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
Nucleotide Protein
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