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LOC5506215 programmed cell death protein 10 [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5506215, updated on 6-Jun-2024

Summary

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Gene symbol
LOC5506215
Gene description
programmed cell death protein 10
Locus tag
NEMVEDRAFT_v1g145856
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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See LOC5506215 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
10
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 9 NC_064042.1 (9500934..9507727, complement)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834203.1 (202479..208839)

Chromosome 9 - NC_064042.1Genomic Context describing neighboring genes Neighboring gene von Willebrand factor D and EGF domain-containing protein Neighboring gene medium-chain acyl-CoA ligase ACSF2, mitochondrial Neighboring gene dynein assembly factor with WDR repeat domains 1 Neighboring gene uncharacterized LOC116614019 Neighboring gene ubiquitin carboxyl-terminal hydrolase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of MAP kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of FAR/SIN/STRIPAK complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
programmed cell death protein 10
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064042.1 Reference jaNemVect1.1

    Range
    9500934..9507727 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001626888.3 → XP_001626938.2  programmed cell death protein 10

    UniProtKB/TrEMBL
    A7SN69

RNA

  1. XR_007313715.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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