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LOC5504626 nucleolar complex protein 2 homolog [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5504626, updated on 25-Jan-2024

Summary

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Gene symbol
LOC5504626
Gene description
nucleolar complex protein 2 homolog
Locus tag
NEMVEDRAFT_v1g247088
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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See LOC5504626 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
18
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 3 NC_064036.1 (2298783..2308006)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834146.1 (247638..256827)

Chromosome 3 - NC_064036.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116612325 Neighboring gene leucine-rich repeat-containing protein 34 Neighboring gene peroxisomal membrane protein PEX14 Neighboring gene uncharacterized LOC5504627 Neighboring gene EF-hand domain-containing protein D2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal large subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Noc1p-Noc2p complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Noc2p-Noc3p complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleolar complex protein 2 homolog
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064036.1 Reference jaNemVect1.1

    Range
    2298783..2308006
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032372957.2 → XP_032228848.1  nucleolar complex protein 2 homolog

    UniProtKB/TrEMBL
    A7SSA7
    Conserved Domains (1) summary
    pfam03715
    Location:352 → 647
    Noc2; Noc2p family
Nucleotide Protein
Heading Accession and Version

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