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LOC5502954 nucleoporin NUP35 [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5502954, updated on 30-Nov-2023

Summary

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Gene symbol
LOC5502954
Gene description
nucleoporin NUP35
Locus tag
NEMVEDRAFT_v1g135138
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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See LOC5502954 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 3 NC_064036.1 (6187251..6193539, complement)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834063.1 (148005..155865, complement)

Chromosome 3 - NC_064036.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC5502964 Neighboring gene uncharacterized LOC116610394 Neighboring gene PHD finger protein 13 Neighboring gene uncharacterized LOC116610400 Neighboring gene 39S ribosomal protein L13, mitochondrial Neighboring gene glucose-induced degradation protein 8 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in NLS-bearing protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear pore organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear pore central transport channel IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear pore nuclear basket IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleoporin NUP35
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064036.1 Reference jaNemVect1.1

    Range
    6187251..6193539 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032371276.2 → XP_032227167.2  nucleoporin NUP35

Nucleotide Protein
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Molecular Biology Databases