klf4 KLF transcription factor 4 [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: klf4provided by Xenbase
Official Full Name: KLF transcription factor 4provided by Xenbase
Primary source: Xenbase:XB-GENE-1015049
See related: Ensembl:ENSXETG00000005739
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as: ezf; gklf; biklf; neptune
Annotation information: Annotation category: partial on reference assembly
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 1

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	1	NC_030677.2 (120791815..120801210, complement)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	1	NC_030677.1 (108563814..108573213, complement)

Chromosome 1 - NC_030677.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables DNA binding	IEA Inferred from Electronic Annotation more info
enables DNA-binding transcription factor activity, RNA polymerase II-specific	IBA Inferred from Biological aspect of Ancestor more info
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in regulation of transcription by RNA polymerase II	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: Krueppel-like factor 4

Names: Kruppel-like factor 4 (gut)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001017280.2 → NP_001017280.1 Krueppel-like factor 4

See identical proteins and their annotated locations for NP_001017280.1

Status: PROVISIONAL

Source sequence(s)

CR855737

UniProtKB/TrEMBL

A0A803KDD3, F7A2W1, Q28D29

Related

ENSXETP00000012646.5, ENSXETT00000012646.5

Conserved Domains (3) summary

sd00017
Location:326 → 348

ZF_C2H2; C2H2 Zn finger [structural motif]

pfam00096
Location:324 → 348

zf-C2H2; Zinc finger, C2H2 type

pfam13465
Location:370 → 395

zf-H2C2_2; Zinc-finger double domain