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LOC5499548 sphingosine-1-phosphate phosphatase 2 [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5499548, updated on 30-Nov-2023

Summary

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Gene symbol
LOC5499548
Gene description
sphingosine-1-phosphate phosphatase 2
Locus tag
NEMVEDRAFT_v1g163601
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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See LOC5499548 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
3
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 7 NC_064040.1 (16959528..16966475, complement)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001832976.1 (14745..19504, complement)

Chromosome 7 - NC_064040.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125568419 Neighboring gene ubiquinone biosynthesis monooxygenase COQ6, mitochondrial Neighboring gene uncharacterized LOC125568210 Neighboring gene uncharacterized LOC116605482 Neighboring gene T-complex protein 1 subunit delta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingosine-1-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingosine-1-phosphate phosphatase 2
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064040.1 Reference jaNemVect1.1

    Range
    16959528..16966475 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048729724.1 → XP_048585681.1  sphingosine-1-phosphate phosphatase 2

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases